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  5. AMTR_s00025p00061990

AMTR_s00025p00061990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.40

No description available


Gene families : OG0001370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00061990

Target Alias Description ECC score Gene Family Method Actions
Aob_g06233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15211.t1 Aspi01Gene15211 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16004.t1 Aspi01Gene16004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16006.t1 Aspi01Gene16006 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16008.t1 Aspi01Gene16008 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17522.t1 Aspi01Gene17522 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene17524.t1 Aspi01Gene17524 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0219.g058614 No alias not classified & original description: CDS=1-411 0.03 OrthoFinder output from all 47 species
Ceric.23G018100.1 Ceric.23G018100 not classified & original description: pacid=50611116... 0.03 OrthoFinder output from all 47 species
Ceric.23G018300.1 Ceric.23G018300 not classified & original description: pacid=50611134... 0.03 OrthoFinder output from all 47 species
Gb_12888 No alias no description available(sp|d9iwe0|gnkl_pinps : 89.7) 0.03 OrthoFinder output from all 47 species
Gb_38429 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g26745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g065040.1.1 Solyc09g065040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR002902 GNK2 53 150
No external refs found!