Aliases : ARF6
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00221770 | ARF1,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
AT1G30330 | ARF6 | auxin response factor 6 | 0.02 | OrthoFinder output from all 47 species | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g020207 | ARF9 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g084657 | ARF19, IAA22, ARF11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g103241 | TIR5, MSG1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11014 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g32730 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g51944 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.18G060100.1 | ARF1, Ceric.18G060100 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g05781 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g36299 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07024 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g14113 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01004942001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01035205001 | ARF8, ATARF8 | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
Gb_31132 | ARF4 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g06910.1 | ARF6, LOC_Os02g06910 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g20412 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05750 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10432528g0010 | ARF4 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
MA_127981g0010 | ARF4 | Auxin response factor 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42998 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002378 | ARF1 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g118290.3.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g047460.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g069190.2.1 | ARF4, Solyc11g069190 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g55179 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10839 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013191_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e017798_P003 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032423_P002 | ARF3, ETT, Zm00001e032423 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR033389 | AUX/IAA_dom | 346 | 433 |
No external refs found! |