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  5. AMTR_s00024p00238310

AMTR_s00024p00238310 (YLMG2, ATYLMG2,...)


Aliases : YLMG2, ATYLMG2, evm_27.TU.AmTr_v1.0_scaffold00024.270

Description : YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00238310

Target Alias Description ECC score Gene Family Method Actions
AT3G07430 emb1990,... YGGT family protein 0.03 OrthoFinder output from all 47 species
AT5G21920 YLMG2, ATYLMG2 YGGT family protein 0.05 OrthoFinder output from all 47 species
Adi_g046778 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g046779 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08970 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04100 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18000 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07670 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02771 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014976 No alias not classified & original description: CDS=84-614 0.02 OrthoFinder output from all 47 species
Ceric.12G048700.1 YLMG2, ATYLMG2,... not classified & original description: pacid=50602487... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.71 YLMG2, ATYLMG2 No description available 0.01 OrthoFinder output from all 47 species
Cre12.g557050 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g31838 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09359 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g10748 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02100 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01031640001 YLMG1-2, ATYLMG1-2 YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035473001 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_33767 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g08080.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g05180 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05213 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_9458287g0010 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g13060.1 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp8g11810.1 YLMG1-2, ATYLMG1-2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g10281 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18597 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18598 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18599 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11582 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06607 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31514 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016203 YLMG2, ATYLMG2 not classified & original description: CDS=1-753 0.05 OrthoFinder output from all 47 species
Sam_g06520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g083110.2.1 YLMG1-2,... YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g061630.3.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Tin_g00523 YLMG2, ATYLMG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000570_P001 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e038876_P002 Zm00001e038876 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004047 aminomethyltransferase activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 122 190
No external refs found!