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  5. AMTR_s00024p00226010

AMTR_s00024p00226010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.226

Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG12-ATG5 ATG8-PE-ligase E3 dimer.ATG12 ubiquitin-fold component


Gene families : OG0008119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00226010
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Solyc12g049310.2.1 ATATG12, ATG12A,... ubiquitin-fold component ATG12 of autophagosome... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007242 Atg12 11 94
No external refs found!