AMTR_s00024p00224180 (MYB3, ATMYB3,...)


Aliases : MYB3, ATMYB3, evm_27.TU.AmTr_v1.0_scaffold00024.221

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00224180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257950 AtMYB17, MYB17,... Transcription factor MYB41 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AMTR_s00010p00267100 ATMIXTA, MYB16,... RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 OrthoFinder output from all 47 species
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.02 OrthoFinder output from all 47 species
Adi_g021584 AtMYB20, MYB20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62102 ATY53, ATMYB67, MYB67 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g13792 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aob_g15863 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17526 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14335 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g32433 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G075100.1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g05482 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g24653 ATMYB119, MYB119 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10049 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003662001 ATMYB102, ATM4, MYB102 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01003675001 AtMYB74, MYB74 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01015102001 MYB3, ATMYB3 RNA biosynthesis.transcriptional activation.MYB... 0.11 OrthoFinder output from all 47 species
GSVIVT01016767001 MYB7, ATY49, ATMYB7 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01028981001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_19333 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_33678 MYB103, AtMYB103 transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Gb_40065 MYB55, AtMYB55 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g28280.1 LOC_Os01g28280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g74410.1 ATMYB59-1,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
LOC_Os02g36890.1 ATMIXTA, MYB16,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45020.1 MYB19, AtMYB19,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os06g02250.1 AtMYB93, MYB93,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g14670.1 AtMYB20, MYB20,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os08g33940.1 MYBCOV1, MYB96,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37970.1 AtMYB93, MYB93,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Len_g12329 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57655 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58292 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Len_g58682 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33689 AtMYB98, MYB98 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_101790g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_10428459g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10432903g0010 ATMYB4, MYB4 transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
MA_128244g0010 AtMYB17, MYB17 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_136123g0010 MYB3, ATMYB3 transcription factor (MYB) 0.08 OrthoFinder output from all 47 species
MA_140579g0010 MYB3, ATMYB3 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_21440g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_34517g0010 AtMYB83, MYB83 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_37851g0010 AtMYB83, MYB83 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_53373g0010 ATMYB5, MYB5 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_53573g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_6393g0010 MYB36, AtMYB36 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_81763g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g09299 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42331 ATMIXTA, MYB16, ATMYB16 transcriptional regulator *(TDF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42355 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14426 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29567 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009506 AtMYB50, MYB50 not classified & original description: CDS=317-1252 0.02 OrthoFinder output from all 47 species
Sam_g03569 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g16919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37504 No alias transcriptional regulator *(MS188) & original description: none 0.01 OrthoFinder output from all 47 species
Smo84195 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc01g005660.3.1 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc01g057910.3.1 AtMYB78, MYB78,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g079280.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc02g091980.2.1 MYB84, RAX3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc03g059200.2.1 ATMYB35, TDF1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc05g008250.2.1 MYB3, ATMYB3,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc07g052300.3.1 ATMYB101,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc07g054840.4.1 ATMYB102, ATM4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc10g005240.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc10g005760.3.1 MYB103,... transcription factor (MYB). transcriptional key... 0.02 OrthoFinder output from all 47 species
Solyc10g081490.2.1 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc10g086270.2.1 AtMYB113,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g005890.3.1 ATMYB101,... Transcription factor MYB101 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g008670.2.1 ATMYB38, MYB38,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Tin_g08979 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-10/24 transcription factor &... 0.02 OrthoFinder output from all 47 species
Tin_g10863 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001404_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e001409_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e019941_P001 MYB37, RAX1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e023277_P001 ATMYB72, MYB72,... transcription factor (MYB) 0.12 OrthoFinder output from all 47 species
Zm00001e034214_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e035025_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e038356_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e038964_P001 MYB305, ATMYB71,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 46 93
IPR001005 SANT/Myb 99 143
No external refs found!