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  5. AMTR_s00024p00220830

AMTR_s00024p00220830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.217

No description available


Gene families : OG0006753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00220830

Target Alias Description ECC score Gene Family Method Actions
AT1G72640 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
Als_g07648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009949 No alias not classified & original description: CDS=69-959 0.04 OrthoFinder output from all 47 species
Ceric.20G008300.1 Ceric.20G008300 not classified & original description: pacid=50566478... 0.02 OrthoFinder output from all 47 species
GSVIVT01016774001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_11587 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_11588 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g29730.1 LOC_Os03g29730 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_911781g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp8g18210.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018435 No alias not classified & original description: CDS=70-963 0.03 OrthoFinder output from all 47 species
Sam_g50663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g049280.3.1 Solyc12g049280 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g10715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!