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  5. AMTR_s00024p00217410

AMTR_s00024p00217410 (MSL10, ATMSL10,...)


Aliases : MSL10, ATMSL10, evm_27.TU.AmTr_v1.0_scaffold00024.206

Description : Solute transport.channels.MSL mechanosensitive ion channel


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00217410

Target Alias Description ECC score Gene Family Method Actions
Adi_g014541 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26895.t1 MSL6, Aspi01Gene26895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38455.t1 MSL5, Aspi01Gene38455 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55266.t1 Aspi01Gene55266 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g14680.1 MSL5 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Msp_g15988 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28707 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 562 766
No external refs found!