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  5. AMTR_s00024p00206190

AMTR_s00024p00206190 (ATBRXL4, BRXL4,...)


Aliases : ATBRXL4, BRXL4, BRX-LIKE4, evm_27.TU.AmTr_v1.0_scaffold00024.190

Description : Protein Brevis radix-like 2 OS=Arabidopsis thaliana


Gene families : OG0001788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001788_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00024p00206190

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015117001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015118001 ATBRXL4, BRXL4, BRX-LIKE4 Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g63650.1 BRXL1, ATBRXL1,... Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Ppi_g31134 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.04 OrthoFinder output from all 47 species
Solyc08g005460.3.1 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g096110.3.1 BRXL1, ATBRXL1,... Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e006397_P001 BRX, NLM9, Zm00001e006397 Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e007054_P001 BRX, NLM9, Zm00001e007054 Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e015552_P003 BRX, NLM9, Zm00001e015552 Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Zm00001e041570_P002 BRXL1, ATBRXL1,... Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 317 349
IPR013591 Brevis_radix_dom 136 193
No external refs found!