Zm00001d022185 (GRMZM2G017368)


Aliases : GRMZM2G017368

Description : 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains


Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d022185
Cluster HCCA cluster: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.06 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
GSVIVT01010510001 No alias 30.11 signalling.light Calmodulin-binding transcription... 0.03 Gene family
GSVIVT01017670001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
LOC_Os04g31900 Os04g0388500 30.11 signalling.light Calmodulin-binding transcription... 0.03 Gene family
LOC_Os07g43030 Os07g0623100 17.5.3 hormone... 0.11 Gene family
LOC_Os10g22950 Os10g0375600 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Smo441667 PACid_15409450 No description available 0.12 Gene family
Solyc04g056270.3.1 Solyc04g056270.3 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
Solyc05g015650.3.1 Solyc05g015650.3 30.11 signalling.light Calmodulin-binding transcription... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 438 527
IPR002909 IPT_dom 234 307
IPR000048 IQ_motif_EF-hand-BS 639 658
IPR000048 IQ_motif_EF-hand-BS 663 682
No external refs found!