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  5. LOC_Os09g32650.1

LOC_Os09g32650.1


Description : leucine-tRNA ligase


Gene families : OG_01_0003677 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003677_tree ,
OG_02_0004150 (LandPlants) Phylogenetic Tree(s): OG_02_0004150_tree ,
OG_03_0004480 (SeedPlants) Phylogenetic Tree(s): OG_03_0004480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32650.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00168060 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
AT1G09620 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.01 Archaeplastida
Cpa|evm.model.tig00022075.68 No alias Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.02 Archaeplastida
GSVIVT01023222001 No alias Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.01 Archaeplastida
Gb_20991 No alias leucine-tRNA ligase 0.01 Archaeplastida
Pp3c1_8450V3.1 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.03 Archaeplastida
Pp3c1_8463V3.1 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.02 Archaeplastida
Smo157130 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Smo410808 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Smo77212 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Solyc02g065300.1.1 No alias leucine-tRNA ligase 0.04 Archaeplastida
Zm00001e006631_P002 No alias leucine-tRNA ligase 0.09 Archaeplastida
Zm00001e009659_P003 No alias leucine-tRNA ligase 0.03 Archaeplastida
AMTR_s00078p00168060 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 LandPlants
AT1G09620 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.01 LandPlants
GSVIVT01023222001 No alias Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.01 LandPlants
Gb_20991 No alias leucine-tRNA ligase 0.01 LandPlants
Pp3c1_8450V3.1 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.03 LandPlants
Pp3c1_8463V3.1 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.02 LandPlants
Smo157130 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 LandPlants
Smo410808 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 LandPlants
Smo77212 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
Solyc02g065300.1.1 No alias leucine-tRNA ligase 0.04 LandPlants
Zm00001e006631_P002 No alias leucine-tRNA ligase 0.09 LandPlants
Zm00001e009659_P003 No alias leucine-tRNA ligase 0.03 LandPlants
AMTR_s00078p00168060 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 SeedPlants
AT1G09620 No alias ATP binding;leucine-tRNA ligases;aminoacyl-tRNA... 0.01 SeedPlants
GSVIVT01023222001 No alias Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.01 SeedPlants
Gb_20991 No alias leucine-tRNA ligase 0.01 SeedPlants
Solyc02g065300.1.1 No alias leucine-tRNA ligase 0.04 SeedPlants
Zm00001e006631_P002 No alias leucine-tRNA ligase 0.09 SeedPlants
Zm00001e009659_P003 No alias leucine-tRNA ligase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 798 913
IPR002300 aa-tRNA-synth_Ia 188 757
IPR002300 aa-tRNA-synth_Ia 25 107
No external refs found!