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  5. AMTR_s00024p00189370

AMTR_s00024p00189370 (APO1,...)


Aliases : APO1, evm_27.TU.AmTr_v1.0_scaffold00024.154

Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00189370

Target Alias Description ECC score Gene Family Method Actions
Als_g07882 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11967 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03932 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G080200.1 emb1629, APO2,... organelle RNA splicing factor *(APO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G036600.1 emb1629, APO2,... organelle RNA splicing factor *(APO) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g41978 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25543 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09642 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04458 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g080250.4.1 APO1, Solyc08g080250 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g24352 APO1 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023481_P001 emb1629, APO2,... APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023342 APO_dom 36 235
No external refs found!