1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00024p00180920

AMTR_s00024p00180920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.142

No description available


Gene families : OG0007316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007316_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00180920
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Ceric.15G047600.1 Ceric.15G047600 not classified & original description: pacid=50640883... 0.03 OrthoFinder output from all 47 species
Ore_g13349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g10564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006020.4.1 Solyc01g006020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035525_P001 Zm00001e035525 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!