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  5. AMTR_s00024p00141270

AMTR_s00024p00141270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.90

No description available


Gene families : OG0001986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00141270
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g33930.1 LOC_Os04g33930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pp3c18_11400V3.1 Pp3c18_11400 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023515 No alias not classified & original description: CDS=170-505 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 39 110
No external refs found!