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  5. AMTR_s00024p00053860

AMTR_s00024p00053860 (KAN, KAN1,...)


Aliases : KAN, KAN1, evm_27.TU.AmTr_v1.0_scaffold00024.21

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00053860

Target Alias Description ECC score Gene Family Method Actions
AT2G01060 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g052692 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04653 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g36053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07758 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10728 KAN, KAN1 KANADI-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12175 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g40224 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37611 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21951.t1 Aspi01Gene21951 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48429.t2 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64388.t1 Aspi01Gene64388 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g05188 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19840 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g03192 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g23636 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06116 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g39820 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16004 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os02g46940.1 KAN2, LOC_Os02g46940 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g25799.1 LOC_Os08g25799 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Nbi_g40003 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26381 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g23688 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17498 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005961 KAN3 not classified & original description: CDS=52-843 0.02 OrthoFinder output from all 47 species
Sam_g18448 No alias KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g066340.4.1 KAN2, Solyc06g066340 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Tin_g14987 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e007231_P002 Zm00001e007231 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 208 259
No external refs found!