Aev_g06010


Description : group-II intron mitochondrial splicing factor *(MISF68) & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g06010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00130470 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49730... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.02 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.03 OrthoFinder output from all 47 species
AT1G71060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25210 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G43820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g057762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12835 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.03 OrthoFinder output from all 47 species
Aob_g15608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007736 No alias not classified & original description: CDS=1-1782 0.03 OrthoFinder output from all 47 species
Cba_g02658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
GSVIVT01014289001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.02 OrthoFinder output from all 47 species
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.02 OrthoFinder output from all 47 species
GSVIVT01025143001 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.02 OrthoFinder output from all 47 species
GSVIVT01026360001 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05860.1 LOC_Os01g05860 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52220.1 LOC_Os02g52220 Pentatricopeptide repeat-containing protein At1g73400,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g11020.1 LOC_Os03g11020 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g51840.1 LOC_Os03g51840 Pentatricopeptide repeat-containing protein At3g49730... 0.02 OrthoFinder output from all 47 species
LOC_Os03g55340.1 LOC_Os03g55340 Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
Len_g19159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432868g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_10434927g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_12748g0020 No alias Pentatricopeptide repeat-containing protein At1g79540... 0.02 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
Msp_g07149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013104 No alias not classified & original description: CDS=32-2083 0.03 OrthoFinder output from all 47 species
Solyc09g097840.2.1 Solyc09g097840 Pentatricopeptide repeat-containing protein At5g18390,... 0.02 OrthoFinder output from all 47 species
Spa_g10895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.02 OrthoFinder output from all 47 species
Zm00001e006773_P001 Zm00001e006773 Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
Zm00001e025816_P001 Zm00001e025816 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e028873_P001 Zm00001e028873 Pentatricopeptide repeat-containing protein At5g15010,... 0.02 OrthoFinder output from all 47 species
Zm00001e036197_P001 Zm00001e036197 Pentatricopeptide repeat-containing protein At1g71060,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 145 176
IPR002885 Pentatricopeptide_repeat 255 301
IPR002885 Pentatricopeptide_repeat 324 373
IPR002885 Pentatricopeptide_repeat 184 233
IPR002885 Pentatricopeptide_repeat 412 459
IPR002885 Pentatricopeptide_repeat 482 529
No external refs found!