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  5. AMTR_s00024p00021530

AMTR_s00024p00021530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.7

Description : UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00021530

Target Alias Description ECC score Gene Family Method Actions
Aev_g08624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G074400.1 Ceric.07G074400 not classified & original description: pacid=50626377... 0.02 OrthoFinder output from all 47 species
GSVIVT01012909001 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50870.1 LOC_Os03g50870 UV-B-induced protein At3g17800, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os04g50860.1 LOC_Os04g50860 UV-B-induced protein At3g17800, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g19088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_40443g0010 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_47866g0010 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g22904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098000.3.1 Solyc03g098000 UV-B-induced protein At3g17800, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 142 268
No external refs found!