1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00024p00013500

AMTR_s00024p00013500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.1

Description : Protein OBERON 3 OS=Arabidopsis thaliana


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00013500
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene20892.t1 Aspi01Gene20892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19917 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Cba_g20827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G012200.1 Ceric.15G012200 transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G032700.1 Ceric.22G032700 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dde_g02398 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011608001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os03g13590.1 LOC_Os03g13590 no description available(sp|q10pc5|tta1_orysj : 1188.0) 0.05 OrthoFinder output from all 47 species
Lfl_g06272 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g34699 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
MA_214119g0010 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g14429 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13835 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g03975 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g62258 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003758 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Smo70453 OBE2 Protein OBERON 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.06 OrthoFinder output from all 47 species
Zm00001e000995_P002 Zm00001e000995 no description available(sp|q10pc5|tta1_orysj : 940.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
InterPro domains Description Start Stop
IPR004082 OBERON 497 761
No external refs found!