1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00023p00182390

AMTR_s00023p00182390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.120

No description available


Gene families : OG0000702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00182390

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273120 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00004p00044490 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00004p00269210 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00009p00075930 No alias No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00236800 No alias No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00013p00247680 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00018p00197830 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00170780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00213240 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00023350 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00036p00211050 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AMTR_s00046p00145130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00220490 No alias No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00120970 No alias No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00063p00206790 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00064p00040440 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00073p00197510 No alias No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00095p00130850 No alias No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00138990 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00106p00075160 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00108p00119250 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00126p00127750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00103960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00140p00047880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00247p00004960 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s01880p00005790 No alias No description available 0.03 OrthoFinder output from all 47 species
AMTR_s02984p00006270 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s03041p00003580 No alias No description available 0.04 OrthoFinder output from all 47 species
AMTR_s03250p00004260 No alias No description available 0.04 OrthoFinder output from all 47 species
AMTR_s03780p00001460 No alias No description available 0.04 OrthoFinder output from all 47 species
AMTR_s03891p00003510 No alias No description available 0.06 OrthoFinder output from all 47 species
MA_9031757g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 92 167
No external refs found!