AMTR_s00023p00171820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.105

No description available


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00171820
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00075010 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.06 OrthoFinder output from all 47 species
AT2G36430 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50150 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
Aev_g02345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19103.t1 Aspi01Gene19103 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22023.t1 Aspi01Gene22023 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49158.t1 Aspi01Gene49158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.04 OrthoFinder output from all 47 species
Ceric.11G038500.1 Ceric.11G038500 not classified & original description: pacid=50595115... 0.03 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01017512001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01022062001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033984001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_08678 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11125 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_20047 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_23451 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36109 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37289 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41229 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21650.1 LOC_Os01g21650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g15500.1 LOC_Os02g15500 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07050.1 LOC_Os08g07050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g33394.1 LOC_Os11g33394 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g33430.1 LOC_Os11g33430 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33942.1 LOC_Os11g33942 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g18264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g42582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435738g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_120951g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_180326g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6919317g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6958038g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_749769g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g02930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g66141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.02 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g008900.4.1 Solyc04g008900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g019313.1.1 Solyc04g019313 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g00455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024232_P001 Zm00001e024232 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004158 DUF247_pln 64 147
No external refs found!