1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00023p00086020

AMTR_s00023p00086020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.41

Description : Patellin-6 OS=Arabidopsis thaliana


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00086020

Target Alias Description ECC score Gene Family Method Actions
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
AT3G51670 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.06 OrthoFinder output from all 47 species
AT4G09160 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.04 OrthoFinder output from all 47 species
Ala_g06939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G077900.1 Ceric.03G077900 not classified & original description: pacid=50572716... 0.04 OrthoFinder output from all 47 species
GSVIVT01021727001 No alias Patellin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030264001 No alias Patellin-6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g65380.1 LOC_Os01g65380 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os05g35460.1 LOC_Os05g35460 Patellin-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os06g45990.2 LOC_Os06g45990 Patellin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g13952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g070210.3.1 Solyc02g070210 Patellin-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g064940.3.1 Solyc06g064940 Patellin-5 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc09g015080.3.1 Solyc09g015080 Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019109_P003 Zm00001e019109 Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e031729_P005 Zm00001e031729 Patellin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 144 305
IPR011074 CRAL/TRIO_N_dom 56 123
No external refs found!