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  5. AMTR_s00023p00073640

AMTR_s00023p00073640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.37

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC)


Gene families : OG0002874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00073640

Target Alias Description ECC score Gene Family Method Actions
AT1G52670 No alias Single hybrid motif superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G15690 No alias Single hybrid motif superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G56130 No alias biotin/lipoyl attachment domain-containing protein 0.06 OrthoFinder output from all 47 species
Aop_g10946 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.02 OrthoFinder output from all 47 species
Aop_g36589 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043767 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.07 OrthoFinder output from all 47 species
Ceric.07G025400.1 Ceric.07G025400 regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.07 OrthoFinder output from all 47 species
Cre01.g037850 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 OrthoFinder output from all 47 species
Dde_g07178 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Gb_03536 No alias acetyl-CoA carboxylase regulator (BADC) 0.03 OrthoFinder output from all 47 species
Ore_g44805 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Pir_g16867 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Solyc06g050590.3.1 Solyc06g050590 acetyl-CoA carboxylase regulator (BADC) 0.05 OrthoFinder output from all 47 species
Spa_g18579 No alias regulatory subunit *(BADC) of polymeric acetyl-CoA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000089 Biotin_lipoyl 152 225
No external refs found!