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  5. AMTR_s00023p00056460

AMTR_s00023p00056460 (PRA1.B3,...)


Aliases : PRA1.B3, evm_27.TU.AmTr_v1.0_scaffold00023.22

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00056460

Target Alias Description ECC score Gene Family Method Actions
Aev_g05773 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0473.g072972 PRA1.B1 not classified & original description: CDS=1-327 0.04 OrthoFinder output from all 47 species
LOC_Os03g53070.1 PRA1.E, LOC_Os03g53070 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
LOC_Os11g01610.1 PRA1.B3, LOC_Os11g01610 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Msp_g02685 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 33 179
No external refs found!