1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00022p00249770

AMTR_s00022p00249770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.380

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1)


Gene families : OG0001885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001885_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00249770

Target Alias Description ECC score Gene Family Method Actions
Ala_g14904 AAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10319 AAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0166.g054420 No alias co-factor of RBX1 activity *(DCN1) in CULLIN-based... 0.02 OrthoFinder output from all 47 species
Sam_g25370 No alias co-factor of RBX1 activity *(DCN1) in CULLIN-based... 0.02 OrthoFinder output from all 47 species
Solyc07g066650.4.1 Solyc07g066650 RUB ligase E3 protein (DCN1) 0.03 OrthoFinder output from all 47 species
Spa_g14310 AAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR005176 PONY_dom 21 117
No external refs found!