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  5. AMTR_s00022p00248730

AMTR_s00022p00248730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.376

Description : Pentatricopeptide repeat-containing protein At1g71210, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0013883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013883_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00022p00248730

Target Alias Description ECC score Gene Family Method Actions
AT1G71210 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Gb_27816 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.05 OrthoFinder output from all 47 species
Gb_27824 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.03 OrthoFinder output from all 47 species
LOC_Os02g03530.1 LOC_Os02g03530 Pentatricopeptide repeat-containing protein At1g71210,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 388 434
IPR002885 Pentatricopeptide_repeat 805 856
IPR002885 Pentatricopeptide_repeat 533 557
IPR002885 Pentatricopeptide_repeat 672 700
IPR002885 Pentatricopeptide_repeat 182 207
IPR002885 Pentatricopeptide_repeat 354 383
IPR002885 Pentatricopeptide_repeat 253 276
IPR002885 Pentatricopeptide_repeat 319 340
IPR002885 Pentatricopeptide_repeat 602 633
No external refs found!