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  5. AMTR_s00022p00247220

AMTR_s00022p00247220 (ATXDH1, XDH1,...)


Aliases : ATXDH1, XDH1, evm_27.TU.AmTr_v1.0_scaffold00022.369

Description : Redox homeostasis.reactive oxygen generation.xanthine dehydrogenase


Gene families : OG0000453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00247220

Target Alias Description ECC score Gene Family Method Actions
AT4G34890 ATXDH1, XDH1 xanthine dehydrogenase 1 0.02 OrthoFinder output from all 47 species
Adi_g055439 ATXDH1, XDH1 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.02 OrthoFinder output from all 47 species
Ceric.21G042700.1 ATXDH1, XDH1,... EC_1.17 oxidoreductase acting on CH or CH2 group &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.113 ATXDH1, XDH1 Xanthine dehydrogenase 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01025882001 ATAO, AT-AO1,... Indole-3-acetaldehyde oxidase OS=Zea mays 0.03 OrthoFinder output from all 47 species
GSVIVT01025883001 At-AO3, AAO3,... Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase 0.03 OrthoFinder output from all 47 species
Lfl_g14747 ATXDH1, XDH1 EC_1.17 oxidoreductase acting on CH or CH2 group &... 0.02 OrthoFinder output from all 47 species
MA_10437166g0010 ATXDH1, XDH1 Xanthine dehydrogenase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_169333g0010 ATAO, AT-AO1,... Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g10900.1 ATXDH1, XDH1 xanthine dehydrogenase. xanthine dehydrogenase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0189.g025200 ATXDH1, XDH1 EC_1.17 oxidoreductase acting on CH or CH2 group &... 0.02 OrthoFinder output from all 47 species
Solyc01g009230.4.1 At-AO3, AAO3,... abscisic aldehyde oxidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005107 CO_DH_flav_C 452 557
IPR000674 Ald_Oxase/Xan_DH_a/b 617 724
IPR002888 2Fe-2S-bd 98 173
IPR001041 2Fe-2S_ferredoxin-type 33 87
IPR008274 AldOxase/xan_DH_MoCoBD1 742 1277
IPR002346 Mopterin_DH_FAD-bd 266 443
No external refs found!