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  5. AMTR_s00022p00230910

AMTR_s00022p00230910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.311

Description : DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana


Gene families : OG0000133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00230910

Target Alias Description ECC score Gene Family Method Actions
AT1G33612 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G12610 DRT100 Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT3G20820 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from all 47 species
Adi_g078680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35578 EFR not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08585 RLP27, AtRLP27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19462.t1 Aspi01Gene19462 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G003400.1 Ceric.11G003400 not classified & original description: pacid=50596353... 0.03 OrthoFinder output from all 47 species
Ehy_g15146 AtRLP30, RLP30 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016034001 BRL1 No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01024435001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028780001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_18382 No alias no description available(sp|q9ljw7|rlp43_arath : 258.0) 0.04 OrthoFinder output from all 47 species
LOC_Os07g28570.1 RLP41, AtRLP41,... Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
MA_10432241g0010 No alias Receptor kinase-like protein Xa21 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_11195g0010 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
MA_6800g0010 No alias Leucine-rich repeat receptor-like... 0.07 OrthoFinder output from all 47 species
Mp1g09700.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.02 OrthoFinder output from all 47 species
Mp2g18660.1 GSO2, EDA23 LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
Mp4g21430.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
Ore_g22611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23051 AtRLP6, RLP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g008600.1.1 Solyc07g008600 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc11g056680.1.1 Solyc11g056680 DNA damage-repair/toleration protein DRT100... 0.03 OrthoFinder output from all 47 species
Solyc12g009730.3.1 AtRLP6, RLP6,... Receptor-like protein Cf-9 homolog OS=Solanum... 0.03 OrthoFinder output from all 47 species
Zm00001e003525_P001 DRT100, Zm00001e003525 DNA damage-repair/toleration protein DRT100... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 227 246
IPR013210 LRR_N_plant-typ 24 63
No external refs found!