LOC_Os09g32090.1


Description : methylation reader (MBD1-4|12)


Gene families : OG_01_0001540 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001540_tree ,
OG_02_0001399 (LandPlants) Phylogenetic Tree(s): OG_02_0001399_tree ,
OG_03_0001916 (SeedPlants) Phylogenetic Tree(s): OG_03_0001916_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32090.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Zm00001e010083_P003 No alias methylation reader (MBD1-4|12) 0.04 Archaeplastida
Zm00001e010083_P003 No alias methylation reader (MBD1-4|12) 0.04 LandPlants
Gb_07320 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e010083_P003 No alias methylation reader (MBD1-4|12) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011124 Znf_CW 79 129
IPR001739 Methyl_CpG_DNA-bd 149 208
No external refs found!