1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00022p00219620

AMTR_s00022p00219620 (PGIP2, ATPGIP2,...)


Aliases : PGIP2, ATPGIP2, evm_27.TU.AmTr_v1.0_scaffold00022.269

Description : Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00219620

Target Alias Description ECC score Gene Family Method Actions
Dcu_g36966 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os05g01380.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g38130.1 LOC_Os07g38130 pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species
LOC_Os09g31450.1 LOC_Os09g31450 pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 146 181
IPR013210 LRR_N_plant-typ 32 68
No external refs found!