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  5. AMTR_s00022p00180990

AMTR_s00022p00180990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.191

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0003364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00180990
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g31454.1 LOC_Os09g31454 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Nbi_g08801 BRD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02387 BRD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 21 79
No external refs found!