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  5. AMTR_s00022p00106940

AMTR_s00022p00106940 (SPL1R2, ATSPL14,...)


Aliases : SPL1R2, ATSPL14, FBR6, SPL14, evm_27.TU.AmTr_v1.0_scaffold00022.95

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00106940

Target Alias Description ECC score Gene Family Method Actions
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.05 OrthoFinder output from all 47 species
Adi_g113317 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01592 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06795 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05362 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51466.t1 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51466.t2 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67651.t1 SPL1, Aspi01Gene67651 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01013452001 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
GSVIVT01017678001 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009405 SPL12 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 167 244
No external refs found!