Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.31
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00172400 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
AT1G15100 | RHA2A | RING-H2 finger A2A | 0.04 | OrthoFinder output from all 47 species | |
AT1G72220 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G57750 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Aev_g02176 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g32159 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g07686 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene27966.t1 | Aspi01Gene27966 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene42978.t2 | Aspi01Gene42978 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.03G066200.1 | Ceric.03G066200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g36466 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g37469 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g40176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g44871 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g24586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25847 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g26468 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Gb_00010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Gb_41385 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g38110.1 | LOC_Os09g38110 | RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Len_g20513 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g19472 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g42863 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g47443 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g03518 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g16553 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g03615 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g39132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g06476 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g17726 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g57166 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g03072 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g10849 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g24030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0132.g022169 | No alias | not classified & original description: CDS=1-657 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g03342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g18767 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Smo59303 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g100100.4.1 | Solyc01g100100 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g114190.1.1 | Solyc03g114190 | RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g01893 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06805 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023260_P001 | Zm00001e023260 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e023969_P001 | Zm00001e023969 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032186_P001 | RHA3B, Zm00001e032186 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 84 | 129 |
No external refs found! |