AMTR_s00022p00048210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.26

No description available


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00048210

Target Alias Description ECC score Gene Family Method Actions
AT2G23700 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT3G13000 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
Adi_g008972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007854 No alias not classified & original description: CDS=424-2331 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.03 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.02 OrthoFinder output from all 47 species
Dac_g03837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01002886001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014994001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32010.1 LOC_Os09g32010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g01740.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018756 No alias not classified & original description: CDS=1-2328 0.04 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000910_P003 Zm00001e000910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003813_P004 Zm00001e003813 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011955_P001 Zm00001e011955 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 470 589
IPR025757 MIP1_Leuzipper 136 219
No external refs found!