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  5. AMTR_s00021p00246740

AMTR_s00021p00246740 (SET29, SDG29, ATX5,...)


Aliases : SET29, SDG29, ATX5, evm_27.TU.AmTr_v1.0_scaffold00021.269

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00246740
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Als_g32779 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aob_g29752 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015423 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08323 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g17819 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_4470V3.1 SDG25, ATXR7, Pp3c13_4470 SET domain protein 25 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025555 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Spa_g47178 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039307_P005 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 436 515
IPR019787 Znf_PHD-finger 631 683
IPR001214 SET_dom 1139 1237
No external refs found!