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  5. AMTR_s00021p00245460

AMTR_s00021p00245460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.265

Description : Protein TSS OS=Arabidopsis thaliana


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00245460

Target Alias Description ECC score Gene Family Method Actions
Adi_g035769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.03 OrthoFinder output from all 47 species
Nbi_g07995 No alias substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... 0.04 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g095900.4.1 Solyc01g095900 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Solyc05g050630.4.1 Solyc05g050630 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0016999 antibiotic metabolic process IEP HCCA
BP GO:0017000 antibiotic biosynthetic process IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030653 beta-lactam antibiotic metabolic process IEP HCCA
BP GO:0030654 beta-lactam antibiotic biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042316 penicillin metabolic process IEP HCCA
BP GO:0042318 penicillin biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072338 lactam metabolic process IEP HCCA
BP GO:0072339 lactam biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!