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  5. AMTR_s00021p00219530

AMTR_s00021p00219530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.202

No description available


Gene families : OG0003807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00219530

Target Alias Description ECC score Gene Family Method Actions
Ala_g26281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026853 No alias not classified & original description: CDS=10-2364 0.04 OrthoFinder output from all 47 species
Dac_g10599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!