AMTR_s00021p00186910 (ATRAC11, ARAC11,...)

Aliases : ATRAC11, ARAC11, ROP1, ROP1AT, ATROP1, evm_27.TU.AmTr_v1.0_scaffold00021.146

Description : Multi-process regulation.Rop GTPase regulatory system.Rop small GTPase

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00186910
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
AT3G51300	ATRAC11, ARAC11,...	RHO-related protein from plants 1	0.03	OrthoFinder output from all 47 species
AT5G45970	ARAC2, RAC2,...	RAC-like 2	0.08	OrthoFinder output from all 47 species
Adi_g068546	ATROP4, ROP4,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g081138	ATRAC11, ARAC11,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g23892	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39511	ATROP4, ROP4,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g01235	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06146	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22369	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32654	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51905	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g03914	ARAC3, RAC3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06422	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35809.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14200	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.18G010600.1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.36G016200.1	ARAC3, RAC3,...	small GTPase *(ROP) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g03585	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g37057	ATRAC11, ARAC11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g42232	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g20297	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g51070	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18052	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g27359	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01018729001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01020653001	ATROP4, ROP4,...	Multi-process regulation.Rop GTPase regulatory...	0.07	OrthoFinder output from all 47 species
GSVIVT01021145001	ARAC2, RAC2,...	Multi-process regulation.Rop GTPase regulatory...	0.08	OrthoFinder output from all 47 species
GSVIVT01024029001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.06	OrthoFinder output from all 47 species
LOC_Os02g20850.1	ATRAC1, ROP3,...	small GTPase (ROP)	0.07	OrthoFinder output from all 47 species
LOC_Os02g50860.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.05	OrthoFinder output from all 47 species
LOC_Os05g43820.1	ARAC7, ROP9,...	small GTPase (ROP)	0.06	OrthoFinder output from all 47 species
LOC_Os06g12790.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Len_g23902	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g37231	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05339	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426447g0010	ATRAC4, ARAC4,...	small GTPase (ROP)	0.04	OrthoFinder output from all 47 species
MA_36432g0010	ARAC3, RAC3,...	small GTPase (ROP)	0.04	OrthoFinder output from all 47 species
MA_948089g0010	ATRAC11, ARAC11,...	small GTPase (ROP)	0.04	OrthoFinder output from all 47 species
Msp_g03491	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g38983	ATRAC11, ARAC11,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13115	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11648	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14285	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07595	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51141	No alias	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g088780.3.1	ARAC9, ATROP8,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Solyc02g077400.4.1	ARAC2, RAC2,...	small GTPase (ROP)	0.08	OrthoFinder output from all 47 species
Spa_g36415	ARAC3, RAC3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	9	179

External Links

No external refs found!

AMTR_s00021p00186910 (ATRAC11, ARAC11,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation