AMTR_s00021p00109520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.58

No description available


Gene families : OG0000797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000797_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00109520

Target Alias Description ECC score Gene Family Method Actions
AT3G03440 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G14510 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aob_g05021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10232.t1 Aspi01Gene10232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61264.t1 Aspi01Gene61264 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010791 No alias not classified & original description: CDS=457-2499 0.03 OrthoFinder output from all 47 species
Cba_g02628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G025600.1 Ceric.17G025600 not classified & original description: pacid=50618595... 0.03 OrthoFinder output from all 47 species
Ceric.22G068900.1 Ceric.22G068900 not classified & original description: pacid=50614620... 0.03 OrthoFinder output from all 47 species
Dcu_g05513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_21721 No alias U-box domain-containing protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g08444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g17690.1 No alias U-box domain-containing protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g09987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014762 No alias not classified & original description: CDS=762-1922 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017857 No alias not classified & original description: CDS=298-1449 0.04 OrthoFinder output from all 47 species
Sam_g02497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067850.2.1 Solyc02g067850 U-box domain-containing protein 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g043700.3.1 Solyc03g043700 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g03328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034144_P001 Zm00001e034144 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!