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  5. AMTR_s00020p00207770

AMTR_s00020p00207770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00020.85

No description available


Gene families : OG0002106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00020p00207770

Target Alias Description ECC score Gene Family Method Actions
Adi_g060975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G095500.1 Ceric.03G095500 not classified & original description: pacid=50571676... 0.03 OrthoFinder output from all 47 species
Dcu_g06504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g13660.1 LOC_Os12g13660 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g05003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429385g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g014640.3.1 Solyc05g014640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017848_P001 Zm00001e017848 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039656_P002 Zm00001e039656 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!