AMTR_s00020p00108940 (UBP2, ATUBP2,...)

Aliases : UBP2, ATUBP2, evm_27.TU.AmTr_v1.0_scaffold00020.39

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease

Gene families : OG0003367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003367_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00020p00108940

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019437	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07996	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27013	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g09668	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os09g32740.1	UBP2, ATUBP2,...	deubiquitinase (UBP1-2)	0.08	OrthoFinder output from all 47 species
MA_42270g0020	ATUBP1, UBP1	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Sam_g40486	No alias	deubiquitinase *(UBP1-2) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g08562	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004221	obsolete ubiquitin thiolesterase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	86	174
IPR001394	Peptidase_C19_UCH	257	1043

External Links

No external refs found!

AMTR_s00020p00108940 (UBP2, ATUBP2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation