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  5. AMTR_s00019p00257260

AMTR_s00019p00257260 (ATATG18G, ATG18G,...)


Aliases : ATATG18G, ATG18G, evm_27.TU.AmTr_v1.0_scaffold00019.461

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0001998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001998_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00019p00257260

Target Alias Description ECC score Gene Family Method Actions
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.03 OrthoFinder output from all 47 species
Aop_g19669 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
GSVIVT01014602001 ATATG18F, G18F, ATG18F Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 OrthoFinder output from all 47 species
Gb_30797 ATATG18G, ATG18G component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os01g57720.1 ATATG18G,... component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Nbi_g02484 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Tin_g04749 ATATG18G, ATG18G component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 371 397
IPR022175 BCAS3 514 761
No external refs found!