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  5. AMTR_s00019p00252890

AMTR_s00019p00252890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.425

Description : Phytohormones.strigolactone.perception and signal transduction.SMXL signal transducer


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00252890

Target Alias Description ECC score Gene Family Method Actions
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 OrthoFinder output from all 47 species
Adi_g116697 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013324 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g17308 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g00958 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029304001 No alias Phytohormones.strigolactone.perception and signal... 0.04 OrthoFinder output from all 47 species
GSVIVT01033944001 No alias Phytohormones.strigolactone.perception and signal... 0.04 OrthoFinder output from all 47 species
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.06 OrthoFinder output from all 47 species
Gb_32221 No alias SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Gb_32222 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os02g33460.1 LOC_Os02g33460 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
LOC_Os04g33980.1 LOC_Os04g33980 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species
MA_15290g0010 No alias Protein SUPPRESSOR OF MAX2 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g08821 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06494 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g007260.3.1 Solyc01g007260 SMXL strigolactone signal transducer 0.05 OrthoFinder output from all 47 species
Solyc05g055200.4.1 Solyc05g055200 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Solyc07g006540.3.1 Solyc07g006540 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
Solyc11g006650.3.1 Solyc11g006650 SMXL strigolactone signal transducer 0.05 OrthoFinder output from all 47 species
Zm00001e008174_P001 Zm00001e008174 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
Zm00001e014748_P001 Zm00001e014748 SMXL strigolactone signal transducer 0.05 OrthoFinder output from all 47 species
Zm00001e024175_P002 Zm00001e024175 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e040845_P001 Zm00001e040845 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0019538 protein metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 155 190
IPR004176 Clp_R_dom 23 54
No external refs found!