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  5. AMTR_s00019p00250330

AMTR_s00019p00250330 (EIR1, WAV6, ATPIN2,...)


Aliases : EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1, evm_27.TU.AmTr_v1.0_scaffold00019.408

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00250330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.05 OrthoFinder output from all 47 species
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.07 OrthoFinder output from all 47 species
Aev_g17447 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26007 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12472 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31784 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G033200.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21490 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011756001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.06 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g51780.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os05g50140.2 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
LOC_Os06g12610.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os11g02950.1 PIN5, LOC_Os11g02950 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_100472g0010 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Pir_g24244 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc03g118740.3.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Solyc04g056620.2.1 PIN5, Solyc04g056620 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Solyc06g059730.3.1 PIN6, Solyc06g059730 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e019540_P001 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 620
No external refs found!