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  5. AMTR_s00019p00244640

AMTR_s00019p00244640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.371

Description : AAA-ATPase At3g28510 OS=Arabidopsis thaliana


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00244640

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00216540 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g04942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G084000.1 Ceric.06G084000 not classified & original description: pacid=50619247... 0.04 OrthoFinder output from all 47 species
Ceric.19G071300.1 Ceric.19G071300 not classified & original description: pacid=50576608... 0.02 OrthoFinder output from all 47 species
Ceric.37G021200.1 Ceric.37G021200 not classified & original description: pacid=50616287... 0.04 OrthoFinder output from all 47 species
Ehy_g18791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_28097g0010 BCS1 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011979 No alias not classified & original description: CDS=1-1437 0.02 OrthoFinder output from all 47 species
Spa_g20171 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g54056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 183 242
IPR025753 AAA_N_dom 2 68
No external refs found!