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  5. AMTR_s00019p00218710

AMTR_s00019p00218710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.272

No description available


Gene families : OG0007740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00218710
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Adi_g014474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029186001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01029189001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g54370.1 LOC_Os02g54370 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os02g54390.1 LOC_Os02g54390 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g54450.1 LOC_Os02g54450 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os05g47880.1 LOC_Os05g47880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09270.1 LOC_Os06g09270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26300.1 LOC_Os09g26300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26310.1 LOC_Os09g26310 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_118743g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119164g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc07g018200.1.1 Solyc07g018200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g044820.1.1 Solyc07g044820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e009858_P001 Zm00001e009858 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e016067_P001 Zm00001e016067 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e032341_P001 Zm00001e032341 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e034227_P001 Zm00001e034227 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e036269_P001 Zm00001e036269 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008378 galactosyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 93 191
No external refs found!