AMTR_s00019p00208460 (ARR10, RR10,...)

Aliases : ARR10, RR10, evm_27.TU.AmTr_v1.0_scaffold00019.250

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00208460

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00176p00045260	ARR1, RR1,...	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	OrthoFinder output from all 47 species
Aev_g07223	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Aspi01Gene31778.t1	RR12, ARR12,...	subgroup ARR-B transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Dac_g39811	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011650001	ARR1, RR1	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	OrthoFinder output from all 47 species
Gb_02800	RR12, ARR12	B-type cytokinin ARR response activator. transcription...	0.05	OrthoFinder output from all 47 species
Gb_37200	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Ppi_g28850	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Zm00001e016123_P001	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.05	OrthoFinder output from all 47 species
Zm00001e036325_P002	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	21	129
IPR001005	SANT/Myb	205	253

External Links

No external refs found!

AMTR_s00019p00208460 (ARR10, RR10,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation