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  5. AMTR_s00019p00203560

AMTR_s00019p00203560 (AFR,...)


Aliases : AFR, evm_27.TU.AmTr_v1.0_scaffold00019.239

Description : F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana


Gene families : OG0004179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00203560
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G30090 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene45836.t1 Aspi01Gene45836 substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01035518001 AFR F-box protein AFR OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo55890 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 68 108
IPR006652 Kelch_1 209 254
No external refs found!