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  5. AMTR_s00019p00197370

AMTR_s00019p00197370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.225

No description available


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00197370
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT5G14895 No alias No description available 0.09 OrthoFinder output from all 47 species
AT5G65613 No alias No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene18000.t1 Aspi01Gene18000 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003863001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_01380 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_19812 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_123095g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_68645g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_80489g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g087030.1.1 Solyc02g087030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g071370.1.1 Solyc06g071370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!