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  5. AMTR_s00019p00193260

AMTR_s00019p00193260 (ATARL1, ARF3, ARL1,...)


Aliases : ATARL1, ARF3, ARL1, evm_27.TU.AmTr_v1.0_scaffold00019.217

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0006121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00193260

Target Alias Description ECC score Gene Family Method Actions
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.03 OrthoFinder output from all 47 species
Adi_g087315 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087316 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00616 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15269 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g12723 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!