Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.158
Description : Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G18670 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G28920 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G01880 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g026101 | ATRING1, RING1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g06976 | XERICO | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g05267 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g00872 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g04682 | RHA3A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g11051 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene14350.t1 | Aspi01Gene14350 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G061100.1 | ATL63, TL63,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001286.17 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Len_g49926 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_77628g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04224 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g05205 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05611 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g23716 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g30102 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
Pp3c24_7770V3.1 | Pp3c24_7770 | hypoxia-responsive family protein / zinc finger... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08523 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g54811 | ATL2, TL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g03514 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g082420.3.1 | Solyc02g082420 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g094385.1.1 | Solyc12g094385 | E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g01502 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g03047 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05219 | ATL4H | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g12002 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 71 | 115 |
No external refs found! |