1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00019p00138200

AMTR_s00019p00138200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.123

Description : Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00138200
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT1G60060 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.03 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34106.t1 Aspi01Gene34106 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39538.t1 Aspi01Gene39538 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40284.t1 Aspi01Gene40284 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51520.t1 Aspi01Gene51520 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015235 No alias not classified & original description: CDS=201-1475 0.05 OrthoFinder output from all 47 species
Cba_g05785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G047700.1 Ceric.31G047700 not classified & original description: pacid=50574676... 0.05 OrthoFinder output from all 47 species
Dac_g01426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_394035g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Msp_g05986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010698 No alias not classified & original description: CDS=200-1438 0.04 OrthoFinder output from all 47 species
Sam_g25625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015792_P001 Zm00001e015792 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e036084_P002 Zm00001e036084 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 53 246
No external refs found!